PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN24219.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 376aa    MW: 41667.8 Da    PI: 6.9639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN24219.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH443.9e-14181227354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  KHN24219.1 181 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 227
                 79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.136178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-11181227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-15182236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-15182234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-13184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.76E-5191230No hitNo description
CDDcd048731.09E-5263314No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MKKELEDQGQ CSSLPIDTKN NIQSYQEHLL QQQMQQNSDI FGGGASRGLM FPPEVSPTLQ  60
QQSWSMPPVH SFNSNPVHYI NNNNTNPVHH HHEQAPFLVP PPTTPSPYAS FFSSRRVVPS  120
LQFAYEGPSS HLDHHHHLRI ISDTLGPMVQ PGSAAPFGLQ AELGKMTAQE IMEAKALAAS  180
KSHSEAERRR RERINNHLAK LRSLLPNTTK TDKASLLAEV IQHVKELKRQ TSLIAETSPV  240
PTESDELTVD AVDEDGKFVI KASLCCEDRS DLLPDLIKTL KALRLRTLKA EITSLGGRVK  300
NVLVITGDED NSNSNTHNGE QSMQQQQQQF CISSIQEALK AVMEKSGGGD ESASGNVKRQ  360
RTTTNNNINI LEQRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186191ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006573268.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_006573269.10.0PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y11e-113BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0B2QVZ40.0A0A0B2QVZ4_GLYSO; Transcription factor bHLH30
TrEMBLK7K2S10.0K7K2S1_SOYBN; Uncharacterized protein
STRINGGLYMA01G22530.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45893458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.15e-84bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]